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Küçük Resim

Global alignment of PPI networks 

Erten, Cesim (Springer, 2021)
Given multiple PPI networks from different species, the global PPI network alignment problem is that of providing a global mapping between the nodes of the networks or subnetworks within them. Functional orthology detection, ...
Küçük Resim

Structure of conflict graphs in constraint alignment problems and algorithms 

Alkan, Ferhat; Bıyıkoğlu, Türker; Demange, Marc; Erten, Cesim (Discrete Mathematics Theoretical Computer Science, 2019)
We consider the constrained graph alignment problem which has applications in biological network analysis. Given two input graphs G1 = (V1, E1), G2 = (V2, E2), two vertices u1, v1 of G1 paired respectively to two vertices ...
Küçük Resim

Target-independent prediction of drug synergies using only drug lipophilicity 

Kazan, Hilal; Yılancıoğlu, Kaan; Weinstein, Zohar B.; Meydan, Cem; Akhmetov, Azat; Toprak, Işıl; Durmaz, Arda; Iossifov, Ivan; Roth, Frederick P.; Çokol, Murat (Journal of Chemical Information and Modeling, 2014)
Physicochemical properties of compounds have been instrumental in selecting lead compounds with increased drug-likeness. However, the relationship between physicochemical properties of constituent drugs and the tendency ...
Küçük Resim

Effect of vitamin d levels on lipid, glucose, vitamin b12 and c-reactive protein in acute ischemic stroke 

Kozacı, Nalan; Çalışkan, Cafer; Avcı, Mustafa; Çalışkan, Gülsüm; Uysal, İlhan (Annals of Medical Research, 2020)
Aim: Stroke ranks second among the causes of death world wideand related disability and death rates are high. Recent studies have shown that vitamin D deficiency is higher in patients with ischemic stroke compared to other ...
Küçük Resim

Prediction of VLDL cholesterol value with machine learning techniques 

Çalışkan, Cafer; Uysal, İlhan (Springer, 2021)
Cholesterol is an oil-like substance that is found in the membranes of animal cells and also carried in blood plasma, which has some vital functions in the human body, especially in the endocrine and digestive systems. ...
Küçük Resim

RBPmotif: a web server for the discovery of sequence and structure preferences of RNA-binding proteins 

Kazan, Hilal; Morris, Quaid (Nucleic acids research, 2013)
RBPmotif web server (http://www.rnamotif.org) implements tools to identify binding preferences of RNA-binding proteins (RBPs). Given a set of sequences that are known to be bound and unbound by the RBP of interest, RBPmotif ...
Küçük Resim

Ranking cancer drivers via betweenness-based outlier detection and random walks 

Erten, Cesim; Houdjedj, Aissa; Kazan, Hilal (BMC Bioinformatics, 2021)
Background Recent cancer genomic studies have generated detailed molecular data on a large number of cancer patients. A key remaining problem in cancer genomics is the identification of driver genes. Results We propose ...
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A novel fuzzy random forest model for meteorological drought classification and prediction in ungauged catchments 

Danandeh Mehr, Ali; Tür, Rıfat; Cafer Çalışkan; Taş, Erkin (Pure and Applied Geophysics, 2020)
This paper presents a new tree-based model, namely Fuzzy Random Forest (FRF), for one month ahead Standardized Precipitation Evapotranspiration Index (SPEI) classification and prediction with a noteworthy application in ...
Küçük Resim

A translational repression complex in developing mammalian neural stem cells that regulates neuronal specification 

Zahr, Siraj K.; Yang, Guang; Kazan, Hilal; Borrett, Michael J.; Voronova, Anastassia; Kaplan, David R.; Miller, Freda D. (Neuron, 2018)
The mechanisms instructing genesis of neuronal sub-types from mammalian neural precursors are not well understood. To address this issue, we have characterized the transcriptional landscape of radial glial precursors (RPs) ...
Küçük Resim

Magnification-specific and magnification-independent classification of breast cancer histopathological image using deep learning approaches 

Taheri, Shahram; Golrizkhatami, Zahra (Springer London, 2023)
Breast cancer (BC) is a massive health problem and a deadly disease, killing millions of people every year. Computerized approaches for automated malignant BC detection can efficiently help in reducing the manual workload ...
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YazarKazan, Hilal (25)Erten, Cesim (10)Houdjedj, Aissa (6)Çalışkan, Cafer (5)Baali, Ilyes (3)Golrizkhatami, Zahra (3)HafezQorani, Saber (3)Taheri, Shahram (3)Ahmed, Rafsan (2)Bruin, Ruben G. de (2)... Daha FazlaKonuCancer (3)Convolutional neural network (3)Kanser (3)BreakHis dataset (2)Breast cancer (2)Cayley grafiği (2)Cayley graph (2)Cholesterol (2)Efficient domination (2)Evrişimli sinir ağı (2)... Daha FazlaYayın Tarihi2020 - 2024 (21)2013 - 2019 (17)Mevcut Dosya(lar)Evet (36)Hayır (2)

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