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MEXCOwalk: mutual exclusion and coverage based random walk to identify cancer modules
(Bioinformatics, 2019)
Motivation: Genomic analyses from large cancer cohorts have revealed the mutational heterogeneity problem
which hinders the identification of driver genes based only on mutation profiles. One way to tackle this problem ...
MITF-MIR211 axis is a novel autophagy amplifier system during cellular stress
(Autophagy, 2019)
Macroautophagy (autophagy) is an evolutionarily conserved recycling and stress response mechanism. Active at basal levels in eukaryotes, autophagy is upregulated under stress providing cells with building blocks such as ...
Datasets on mathematical modeling of multi-product multi-stage production to analyze the relationship between production yield, demand, and costs
(Data in Brief, 2019)
The data presented in this article are related to the research article “Optimal procurement and production planning for multi-product multi-stage production under yield uncertainty” (Talay and Özdemir-Akyıldırım, in press) ...
Independent effects on cellular and humoral immune responses underlie genotype-by- genotype interactions between Drosophila and parasitoids
(PLoS Pathogens, 2019)
It is common to find abundant genetic variation in host resistance and parasite infectivity within populations, with the outcome of infection frequently depending on genotype-specific interactions. Underlying these effects ...
RBPSponge: genome-wide identification of lncRNAs that sponge RBPs
(Bioinformatics, 2019)
Long non-coding RNAs (lncRNAs) can act as molecular sponge or decoys for an RNA-binding protein (RBP) through their RBP-binding sites, thereby modulating the expression of all target genes of the corresponding RBP of ...
Pythagorean fuzzy VIKOR-based approach for safety risk assessment in mine industry
(Journal of Safety Research, 2019)
Introduction: Underground mining is considered one of the most hazardous industries and is often associated with serious work-related fatalities; this paper addresses job-related hazards and associated risks. Method: A ...